Stem-loop tca-mir-3864

Accession

MI0016354

Description

Tribolium castaneum tca-mir-3864 precursor miRNA

Sequence

agugauguggGGCGACAUAGGCAUGGUUUGAGUUUGuuuaauaaacuUGAAACCUCCUACUAUGUCGCagaauaauuag
.....(((...(((((((((....(((((((((((((...)))))))).))))).....)))))))))...))).....

Structure

aguga   ggG         -GCAU     -        u 
     ugu   GCGACAUAG     GGUUU GAGUUUGu  
     |||   |||||||||     ||||| |||||||| u
     aua   CGCUGUAUC     CCAAA Uucaaaua  
gauua   aga         AUCCU     G        a 

Annotation confidence Low

Genome context

ChLG9: 8929305-8929383 [-]

Mature tca-miR-3864-5p

• Accession: MIMAT0018812
• Description: Tribolium castaneum tca-miR-3864-5p mature miRNA
• Sequence: 11 - GGCGACAUAGGCAUGGUUUGAGUUUG - 36
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3864-3p

• Accession: MIMAT0018813
• Description: Tribolium castaneum tca-miR-3864-3p mature miRNA
• Sequence: 48 - UGAAACCUCCUACUAUGUCGC - 68
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696