Stem-loop tca-mir-3854

Accession

MI0016329

Description

Tribolium castaneum tca-mir-3854 precursor miRNA

Sequence

cgacACCACAAUCCCAGCUCCACauuauugcauuucaaaaauaaUAGUGGCGUUUAGUAUUGUGGaaauu
.....((((((((..(((.((((((((((..........)))))).)))).)))..).))))))).....

Structure

cgacA       - CC   U    -      gcau 
     CCACAAU C  AGC CCAC auuauu    u
     ||||||| |  ||| |||| ||||||     
     GGUGUUA G  UUG GGUG Uaauaa    u
uuaaa       U AU   C    A      aaac 

Annotation confidence Not enough data

Genome context

ChLG5: 2503217-2503286 [-]

Mature tca-miR-3854-5p

• Accession: MIMAT0018764
• Description: Tribolium castaneum tca-miR-3854-5p mature miRNA
• Sequence: 5 - ACCACAAUCCCAGCUCCAC - 23
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3854-3p

• Accession: MIMAT0018765
• Description: Tribolium castaneum tca-miR-3854-3p mature miRNA
• Sequence: 45 - UAGUGGCGUUUAGUAUUGUGG - 65
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696