Stem-loop ame-mir-3797

Accession

MI0016212

Description

Apis mellifera ame-mir-3797 precursor miRNA

Sequence

cgggaCAGAACUGGCUCGUAUUUUAUUucaagugucaaaccuccucucgaaaccuccgcuccgugagagacguuucgcguccgagcggaaagaggagaaagaaaggaagaaauaaagagaggaaccgucguguaucgu
(((.(((..((.((.((.(.(((((((((.....((....(((((((.......((((((((((((((....)))))))...))))))).)))))))...))......)))))))))..).)).))))..))).))).

Structure

-   g   GA  U  C  G -A         -aagug  aaac       cgaaacc       ---       g 
 cgg aCA  AC GG UC U  UUUUAUUuc      uc    cuccucu       uccgcuc   cgugaga a
 ||| |||  || || || |  |||||||||      ||    |||||||       |||||||   |||||||  
 gcu ugu  ug cc ag a  gaaauaaag      ag    gaggaga       aggcgag   gcgcuuu c
u   a   gc  -  a  g ga         aaggaa  -aaa       ------a       ccu       g 

Annotation confidence Not enough data

Genome context

CM000069.5: 3505663-3505800 [+]

Mature ame-miR-3797-5p

• Accession: MIMAT0018582
• Description: Apis mellifera ame-miR-3797-5p mature miRNA
• Sequence: 6 - CAGAACUGGCUCGUAUUUUAUU - 27
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226