Stem-loop ame-mir-3788

Accession

MI0016197

Description

Apis mellifera ame-mir-3788 precursor miRNA

Sequence

cucgaccgcuccuuaaucaggguaGUUCCGUUACCUCCUGUCCCUCgcaaucgucaucgucccugaccaagaacgacccaagagagcgggagccggaagcgaucccaggguca
...((((.((.........(((...(((((....(((((((..(((....(((((...(((...)))...).)))).....))).))))))).))))).....))))))))).

Structure

cuc    g  ccuuaauca   --uaG     UUAC       CC   -gcaa    - auc   c 
   gacc cu         ggg     UUCCG    CUCCUGU  CUC     ucgu c   guc  
   |||| ||         |||     |||||    |||||||  |||     |||| |   ||| c
   cugg ga         ccc     aaggc    gagggcg  gag     agca g   cag  
--a    -  ---------   uagcg     ---c       -a   aaccc    a aac   u 

Annotation confidence Not enough data

Genome context

CM000065.5: 7970196-7970308 [+]

Mature ame-miR-3788-5p

• Accession: MIMAT0018567
• Description: Apis mellifera ame-miR-3788-5p mature miRNA
• Sequence: 25 - GUUCCGUUACCUCCUGUCCCUC - 46
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805