Stem-loop ame-mir-3718b

Accession

MI0016156

Description

Apis mellifera ame-mir-3718b precursor miRNA mir-3718

Gene
family

RF03952; mir-3718

Sequence

uucgauucaguaccgauucucacuaUCGGGACAGGACAGGGGACAGAaugguuauaccgaaauggcccugcccuacccuauccugauccgauaauguaaaucgggaacgac
.(((.(((....((((((..((.(((((((.(((((.((((..(((...((((((......))))))))).....)))).))))).))))))).))..)))))))))))).

Structure

u   a   agua      cu  c       A     C    ---GA   Aau      ac 
 ucg uuc    ccgauu  ca uaUCGGG CAGGA AGGG     CAG   gguuau  c
 ||| |||    ||||||  || ||||||| ||||| ||||     |||   ||||||   
 agc aag    ggcuaa  gu auagccu guccu uccc     guc   ccggua  g
c   -   ----      au  a       a     a    auccc   ---      aa 

Annotation confidence Not enough data

Genome context

CM000059.5: 6820246-6820356 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ame-mir-3718b

Mature ame-miR-3718b-5p

• Accession: MIMAT0018526
• Description: Apis mellifera ame-miR-3718b-5p mature miRNA
• Sequence: 26 - UCGGGACAGGACAGGGGACAGA - 47
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805