Stem-loop ame-mir-3754

Accession

MI0016154

Description

Apis mellifera ame-mir-3754 precursor miRNA

Sequence

acauguguggugucuugacacgauugccggcuuUCAUGGUGAAAAACUCAUUCUUUacgugcgcgagcaacguggaauagggaaugauuauuaccgaagccgguuaguguaauaggacucgucgauuga
.((..(((((.((((((((((....(((((((((...(((((.((..((((((((((..(.((((.....)))).).)))))))))))).))))))))))))))..))))..))))))))).))..)).

Structure

a  ug  -   u      --    gauu         CAU     A  AC          cg g    a 
 ca  ug ugg gucuug  acac    gccggcuuU   GGUGA AA  UCAUUCUUUa  u cgcg g
 ||  || ||| ||||||  ||||    |||||||||   ||||| ||  ||||||||||  | |||| c
 gu  gc gcu caggau  ugug    uggccgaag   ccauu uu  aguaagggau  a gugc a
a  ua  u   -      aa    --au         ---     a  --          -a g    a 

Annotation confidence Not enough data

Genome context

CM000062.5: 9570422-9570550 [+]

Mature ame-miR-3754-5p

• Accession: MIMAT0018524
• Description: Apis mellifera ame-miR-3754-5p mature miRNA
• Sequence: 34 - UCAUGGUGAAAAACUCAUUCUUU - 56
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805