Stem-loop pab-MIR3710

Accession

MI0016113

Description

Picea abies pab-MIR3710 precursor miRNA

Literature search

1 open access papers mention pab-MIR3710
(2 sentences)

Sequence

agacgcuuccagacucgguugggaaccugacgggccuccaaagucuuacccugaacaguugcuuggcucugcagacgcuuccagacucuguUGGGAACCUGACGGGCCUCCAaagucuugucaugauccuuugc
.((((.....(((((...(((((..((((.((((..((((((((((......(((..(((((........))).))..))).)))))...)))))..)))).))))..))))))))))))))............

Structure

-----------a    cuucc     cgg     aa    a    cc     ---     uacccu   ca  -   uug 
            gacg     agacu   uuggg  ccug cggg  uccaa   agucu      gaa  gu ugc   g
            ||||     |||||   |||||  |||| ||||  |||||   |||||      |||  || |||    
            cugu     ucuga   aACCU  GGGC GUCC  GGGUu   ucaga      cuu  ca acg   c
cguuuccuagua    -----     ---     CC    A    AA     guc     -----c   cg  g   ucu 

Annotation confidence Not enough data

Genome context

MA_10042710: 1750-1883 [-]

Mature pab-miR3710

• Accession: MIMAT0018143
• Description: Picea abies pab-miR3710 mature miRNA
• Sequence: 92 - UGGGAACCUGACGGGCCUCCA - 112
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169