Stem-loop pab-MIR3707

Accession

MI0016109

Description

Picea abies pab-MIR3707 precursor miRNA

Sequence

aagccacauccaguaccaggauuuauagauuugggagauugacuuauaaugacaugugAUGAUCUGCCAUUAUCCUUGAaaguauuuggagcgcuug
((((....((((((((((((((.........(((.(((((...(((((......))))).))))).)))..)))).))...))).)))))..)))).

Structure

-    caca     -   ---  -    uuauagauu   g     gac     au 
 aagc    uccag uac   ca ggau         ugg agauu   uuaua  g
 ||||    ||||| |||   || ||||         ||| |||||   |||||   
 uucg    agguu aug   GU CCUA         ACC UCUAG   Agugu  a
g    --cg     u   aaA  U    -------UU   G     --U     ac 

Annotation confidence Not enough data

Genome context

MA_818265: 2245-2341 [+]

Mature pab-miR3707

• Accession: MIMAT0018139
• Description: Picea abies pab-miR3707 mature miRNA
• Sequence: 59 - AUGAUCUGCCAUUAUCCUUGA - 79
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169