Stem-loop pab-MIR3705

Accession

MI0016107

Description

Picea abies pab-MIR3705 precursor miRNA

Literature search

2 open access papers mention pab-MIR3705
(2 sentences)

Sequence

uuuugcagacGUAAGUGGUUAUGAUCUGGACggcggcaaguuuaacgggugagaccuccaacucccucucuauggauagaauauauuauauaugaugcuuugccuaugauuucgauuauuuauuuguuuguuuga
....((((((((((((((((..((((.....(((((((........(((.(((........)))))).((((....))))(((((...)))))..))))..)))...))))..))))))))))..))))))....

Structure

uuuu      --          AU    UGGAC   --    --------------------aguuuaac   u   acc 
    gcagac  GUAAGUGGUU  GAUC     ggc  ggca                            ggg gag   u
    ||||||  ||||||||||  ||||     |||  ||||                            ||| |||    
    uguuug  uauuuauuag  uuag     ccg  ucgu                            ucc cuc   c
aguu      uu          cu    --uau   uu    aguauauauuauauaagauagguaucuc   -   aac 

Annotation confidence Not enough data

Genome context

MA_10430493: 1449-1583 [-]

Mature pab-miR3705

• Accession: MIMAT0018137
• Description: Picea abies pab-miR3705 mature miRNA
• Sequence: 11 - GUAAGUGGUUAUGAUCUGGAC - 31
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169