Stem-loop pab-MIR3702

Accession

MI0016104

Description

Picea abies pab-MIR3702 precursor miRNA

Sequence

38111 reads, 1195.0 reads per million, 98 experiments

acgcAAUCUCUUGGUGCUUAUUCGCaaucauggcuguggaucggaugccuggaacacuaaaacgaagagaucacggccaugauugcuaAUGAACUACAUGGUUGAGU
((.(((((...((((..(((((.((((((((((((((((.((.......(((....))).......))..)))))))))))))))).)))))))))...))))).))

Structure

  g     UCU    GC     C                -a  ggaugcc   a 
ac cAAUC   UGGU  UUAUU GCaaucauggcugugg  uc       ugg a
|| |||||   ||||  ||||| ||||||||||||||||  ||       |||  
UG GUUGG   AUCA  AGUAa cguuaguaccggcacu  ag       auc c
  A     UAC    --     u                ag  aagcaaa   a 

Annotation confidence High

Genome context

MA_11344: 53933-54039 [+]

Mature pab-miR3702-5p

• Accession: MIMAT0018134
• Description: Picea abies pab-miR3702-5p mature miRNA
• Sequence: 5 - AAUCUCUUGGUGCUUAUUCGC - 25
• Evidence: experimental ; cloned [1]

Mature pab-miR3702-3p

• Accession: MIMAT0057421
• Description: Picea abies pab-miR3702-3p mature miRNA
• Sequence: 89 - AUGAACUACAUGGUUGAGU - 107
• Evidence: experimental ; unknown

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169