Stem-loop dme-mir-3645

Accession

MI0016045

Description

Drosophila melanogaster dme-mir-3645 precursor miRNA

Sequence

28 reads, 1 reads per million, 18 experiments

GUGAGUGCAGGCUGUUUAUUGcggcgcuguuuacuguuuacgaucgcacuggaagugcgcuuuccggcgccUUUGGAAGCCAGCACUCAAGUuuccuucauuguuuuccuuucuuuccccucucucucuccccgcag
.(((((((.((((.((((....(((((((............((.((((((...))))))...)))))))))..)))))))).)))))))................................................

Structure

-----------------------------------------------G       A    G    UUGc       uuuacuguuuac  --u      g 
                                                UGAGUGC GGCU UUUA    ggcgcug            ga   cgcacu  
                                                ||||||| |||| ||||    |||||||            ||   |||||| g
                                                ACUCACG CCGA AGGU    ccgcggc            cu   gcguga  
gacgccccucucucucuccccuuucuuuccuuuuguuacuuccuuUGA       A    -    --UU       ------------  uuc      a 

Annotation confidence Not enough data

Genome context

chrX: 5622280-5622416 [-]

Mature dme-miR-3645-5p

• Accession: MIMAT0018063
• Description: Drosophila melanogaster dme-miR-3645-5p mature miRNA
• Sequence: 1 - GUGAGUGCAGGCUGUUUAUUG - 21
• Evidence: experimental ; Illumina [1]

Mature dme-miR-3645-3p

• Accession: MIMAT0018064
• Description: Drosophila melanogaster dme-miR-3645-3p mature miRNA
• Sequence: 72 - UUUGGAAGCCAGCACUCAAGU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20620959
   MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila
   "Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC"
   "Mol Cell (2010) 38:900-907