Stem-loop bta-mir-3604-1

Accession

MI0015950

Description

Bos taurus bta-mir-3604-1 precursor miRNA

Literature search

1 open access papers mention bta-mir-3604-1
(1 sentences)

Sequence

7421296 reads, 3586.0 reads per million, 126 experiments

cccagccUAACCAAUGUGCAGACUACUGUacacauucagagcccccuGAACAGGUAGUCUGAACACUGGGuuggcggg
(((.(((...(((.(((.(((((((((.......(((((......)))))..))))))))).))).)))...))))))

Structure

   a   UAA   A   G         GUacaca     ag 
ccc gcc   CCA UGU CAGACUACU       uucag  c
||| |||   ||| ||| |||||||||       |||||   
ggg cgg   GGU ACA GUCUGAUGG       AAGuc  c
   -   uuG   C   A         -----AC     cc 

Annotation confidence Medium

Genome context

7: 15283408-15283485 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-3604-1

Mature bta-miR-3604-5p

• Accession: MIMAT0016939
• Description: Bos taurus bta-miR-3604-5p mature miRNA
• Sequence: 8 - UAACCAAUGUGCAGACUACUGU - 29
• Evidence: experimental ; cloned [1]

Mature bta-miR-3604-1-3p

• Accession: MIMAT0050969
• Description: Bos taurus bta-miR-3604-1-3p mature miRNA
• Sequence: 48 - GAACAGGUAGUCUGAACACUGGG - 70
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19765282
   Identification and characterization of miRNAs expressed in the bovine ovary
   Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
   BMC Genomics (2009) 10:443