Stem-loop ssc-mir-4339

Accession

MI0015935

Description

Sus scrofa ssc-mir-4339 precursor miRNA

Literature search

3 open access papers mention ssc-mir-4339
(3 sentences)

Sequence

cugugcuccgGCUCUGAGCUGCCCCUCCUCGUCCguccccuccagcuggagaggagccgcgacagagccggagcaguggc
(..(((((((((((((...(((..((((((.(((((........)).)))))))))..))).)))))))))))))..)..

Structure

-- ug             AGC   CC      G   -  ccc 
  c  ugcuccgGCUCUG   UGC  CUCCUC UCC gu   c
  |  |||||||||||||   |||  |||||| ||| ||    
  g  acgaggccgagac   gcg  gaggag agg cg   u
cg ug             --a   cc      -   u  acc 

Annotation confidence Low

Genome context

Unknown

Mature ssc-miR-4339

• Accession: MIMAT0017980
• Description: Sus scrofa ssc-miR-4339 mature miRNA
• Sequence: 11 - GCUCUGAGCUGCCCCUCCUCGUCC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275