Accession
MI0015515
Description
Ciona intestinalis
cin-mir-4001d precursor miRNA
Sequence
2099
reads,
493.0
reads per million, 3 experiments
UGGAACUUGUUUUGAACAGGCUUCaaccagaccaugaGCCUGCUCAAACUAGUUCUCGU
.((((((.((((.((.(((((((............))))))).)))))).))))))...
.((((((.((((.((.(((((((............))))))).)))))).))))))...
Structure
--U U U A Caacc GGAACU GUUU GA CAGGCUU a |||||| |||| || ||||||| UCUUGA CAAA CU GUCCGag g UGC U - C uacca
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4154015-4154073 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4001d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4001d-5p
| Accession | MIMAT0016452 |
| Description | Ciona intestinalis cin-miR-4001d-5p mature miRNA |
| Sequence | 1 - UGGAACUUGUUUUGAACAGGCUUC - 24 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4001d-3p
| Accession | MIMAT0016453 |
| Description | Ciona intestinalis cin-miR-4001d-3p mature miRNA |
| Sequence | 38 - GCCUGCUCAAACUAGUUCUCGU - 59 |
| Evidence |
experimental
Illumina [1] |
References
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