Accession
MI0015511
Description
Ciona intestinalis
cin-mir-4001i precursor miRNA
Sequence
204017
reads,
19558.0
reads per million, 7 experiments
AGGAACUUCCCAAGGAACAGGCUaaccuugcagCCUGUCCCCGGGCAUUCCGA
.((((...(((..(((.((((((........)))))))))..)))..))))..
.((((...(((..(((.((((((........)))))))))..)))..))))..
Structure
-A CUU AA A aac GGAA CCC GGA CAGGCU c |||| ||| ||| |||||| CCUU GGG CCU GUCCga u AG -AC CC - cgu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020168.1|: 569448-569500 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from cin-mir-4001i
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4001i-5p
| Accession | MIMAT0016966 |
| Description | Ciona intestinalis cin-miR-4001i-5p mature miRNA |
| Sequence | 1 - AGGAACUUCCCAAGGAACAGGCU - 23 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4001i-3p
| Accession | MIMAT0016967 |
| Description | Ciona intestinalis cin-miR-4001i-3p mature miRNA |
| Sequence | 34 - CCUGUCCCCGGGCAUUCCGA - 53 |
| Evidence |
experimental
Illumina [1] |
References
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