Accession
MI0015507
Description
Ciona intestinalis
cin-mir-4000h precursor miRNA
Sequence
55666
reads,
5869.0
reads per million, 8 experiments
UGAAACUUGCUUAGUACGGGCCUgaguaagGCCGUUCUUUGCAAGUUUUGUU
.(((((((((..((.((((.(((.....))))))).))..)))))))))...
.(((((((((..((.((((.(((.....))))))).))..)))))))))...
Structure
--U UU U G g GAAACUUGC AG ACGG CCU a ||||||||| || |||| ||| g UUUUGAACG UC UGCC Gga u UUG UU U - a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4154350-4154402 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4000h
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000h-5p
| Accession | MIMAT0016440 |
| Description | Ciona intestinalis cin-miR-4000h-5p mature miRNA |
| Sequence | 1 - UGAAACUUGCUUAGUACGGGCCU - 23 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000h-3p
| Accession | MIMAT0016441 |
| Description | Ciona intestinalis cin-miR-4000h-3p mature miRNA |
| Sequence | 31 - GCCGUUCUUUGCAAGUUUUGUU - 52 |
| Evidence |
experimental
Illumina [1] |
References
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