Accession
MI0015506
Description
Ciona intestinalis
cin-mir-4000g precursor miRNA
Sequence
38796
reads,
3826.0
reads per million, 7 experiments
UGAAACUUCUUUAGAAAGGGCCUgcuuuagGCUCAUUCUAGGACGUUUUA
((((((.((((.((((.(((((((...))))))).)))))))).))))))
((((((.((((.((((.(((((((...))))))).)))))))).))))))
Structure
U U A c
UGAAAC UCUU AGAA GGGCCUg
|||||| |||| |||| ||||||| u
AUUUUG AGGA UCUU CUCGgau
C - A u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4154117-4154166 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4000g
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000g-5p
| Accession | MIMAT0016438 |
| Description | Ciona intestinalis cin-miR-4000g-5p mature miRNA |
| Sequence | 1 - UGAAACUUCUUUAGAAAGGGCCU - 23 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000g-3p
| Accession | MIMAT0016439 |
| Description | Ciona intestinalis cin-miR-4000g-3p mature miRNA |
| Sequence | 31 - GCUCAUUCUAGGACGUUUUA - 50 |
| Evidence |
experimental
Illumina [1] |
References
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