Accession
MI0015498
Description
Ciona intestinalis
cin-mir-4000c precursor miRNA
Sequence
40201
reads,
3968.0
reads per million, 7 experiments
UGAAACUUGCGUGGAACGGGCCACUcugccagGCCGUUGUAAACAUGUUUCG
.(((((.((..((.(((((.((.........))))))).))..)).))))).
.(((((.((..((.(((((.((.........))))))).))..)).))))).
Structure
U U CG G G ACU GAAAC UG UG AACGG CC c ||||| || || ||||| || u CUUUG AC AU UUGCC Gg g G U AA G - acc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020172.1|: 4154708-4154759 [+]
Clustered miRNAs
24 other miRNAs are < 10 kb from cin-mir-4000c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000c-5p
| Accession | MIMAT0016426 |
| Description | Ciona intestinalis cin-miR-4000c-5p mature miRNA |
| Sequence | 1 - UGAAACUUGCGUGGAACGGGCCACU - 25 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000c-3p
| Accession | MIMAT0016427 |
| Description | Ciona intestinalis cin-miR-4000c-3p mature miRNA |
| Sequence | 33 - GCCGUUGUAAACAUGUUUCG - 52 |
| Evidence |
experimental
Illumina [1] |
References
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