Accession
MI0015496
Description
Ciona intestinalis
cin-mir-92d precursor miRNA
Literature search
2 open access papers mention cin-mir-92d
(2 sentences)
(2 sentences)
Sequence
6842
reads,
584.0
reads per million, 8 experiments
GGUCGUGUUUGGUGUAUCAUACUuaagcaaacacagUAUUGCACCUGUCCCGGCCG
(((((.(...((((((..(((((...........)))))))))))...).))))).
(((((.(...((((((..(((((...........)))))))))))...).))))).
Structure
- U UUU UC uaag GGUCG G GGUGUA AUACU c ||||| | |||||| ||||| a CCGGC C CCACGU UAUga a G C UGU -- caca
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_020168.1|: 884985-885040 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cin-mir-92d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-92d-5p
| Accession | MIMAT0016423 |
| Description | Ciona intestinalis cin-miR-92d-5p mature miRNA |
| Sequence | 1 - GGUCGUGUUUGGUGUAUCAUACU - 23 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-92d-3p
| Accession | MIMAT0016424 |
| Description | Ciona intestinalis cin-miR-92d-3p mature miRNA |
| Sequence | 37 - UAUUGCACCUGUCCCGGCCG - 56 |
| Evidence |
experimental
Illumina [1] |
References
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