Stem-loop rno-mir-741

Accession

MI0015477

Description

Rattus norvegicus rno-mir-741 precursor miRNA

Literature search

3 open access papers mention rno-mir-741
(15 sentences)

Sequence

6474 reads, 254 reads per million, 80 experiments

aaugucucaugugcauuggucUACAUAGAUUGGUACCUAUCAuguaaaauaagugugAAAGAUGCCACGCUAUGUAGAUcaacgcucaugacauuc
((((((..(((.((.(((((((((((((..(((((.((.((((...........)))).)).)))))..))))))))))))).)).))))))))).

Structure

-      uc   u  a             AU     C  A    guaa 
 aauguc  aug gc uuggucUACAUAG  UGGUA CU UCAu    a
 ||||||  ||| || |||||||||||||  ||||| || ||||    a
 uuacag  uac cg aacUAGAUGUAUC  ACCGU GA Agug    u
c      --   u  c             GC     A  A    ugaa 

Annotation confidence Not enough data

Genome context

chrX: 151274356-151274451 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rno-mir-741

Mature rno-miR-741-5p

• Accession: MIMAT0017901
• Description: Rattus norvegicus rno-miR-741-5p mature miRNA
• Sequence: 22 - UACAUAGAUUGGUACCUAUCA - 42
• Evidence: experimental ; SOLiD [1]

Mature rno-miR-741-3p

• Accession: MIMAT0017902
• Description: Rattus norvegicus rno-miR-741-3p mature miRNA
• Sequence: 58 - AAAGAUGCCACGCUAUGUAGAU - 79
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249