Stem-loop rno-mir-3566

Accession

MI0015431

Description

Rattus norvegicus rno-mir-3566 precursor miRNA

Sequence

76 reads, 1 reads per million, 57 experiments

agccgcugcgcggggccugcugggaaauguaguucaaaguucggcacgagcugcaggucuCUGCCUAACAAUGAACUACCacucccaguagucaacgcugcucagggcu
((((.(((.((((.(.(((((((((...((((((((..(((.((((.(((((...)).))))))).)))..))))))))...)))))))))....).)))).)))))))

Structure

    g   c    g ---c         aau        aa   c    c   -  g 
agcc cug gcgg g    cugcuggga   guaguuca  guu ggca gag cu  
|||| ||| |||| |    |||||||||   ||||||||  ||| |||| ||| || c
ucgg gac cguc c    gaugacccu   CAUCAAGU  CAA CCGU Cuc gg  
    -   u    g aacu         caC        AA   U    -   u  a 

Annotation confidence Not enough data

Genome context

chr17: 21353604-21353712 [+]

Mature rno-miR-3566

• Accession: MIMAT0017841
• Description: Rattus norvegicus rno-miR-3566 mature miRNA
• Sequence: 61 - CUGCCUAACAAUGAACUACC - 80
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249