Stem-loop sja-mir-277

Accession

MI0015296

Description

Schistosoma japonicum sja-mir-277 precursor miRNA

Literature search

4 open access papers mention sja-mir-277
(23 sentences)

Sequence

auaannnnnnnnnnauauugUAAAUGCAUUUUCUGGCCCGuaacuaagacacaaugaacauccuuaucuuugauaguuuuuaaaaguuaaguuuuguuuugucuugucaauguaauagauguccuuucuuuucagugauggg
.........................(((...((((...(((...(((((((....(((((..((((.((((...........)))).))))...))))))))))))...)))...)))))))(((.((........)).)))

Structure

auaannnnnnnnnnauauugUAAAU   UUU    GCC   aac       caau     -uc    u    gaua 
                         GCA   UCUG   CGu   uaagaca    gaaca   cuua cuuu    g
                         |||   ||||   |||   |||||||    |||||   |||| ||||    u
                         ugu   agau   gua   guucugu    uuugu   gaau gaaa    u
-----ggguagugacuuuucuuucc   ---    aau   acu       ----     uuu    u    auuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature sja-miR-277

• Accession: MIMAT0016269
• Description: Schistosoma japonicum sja-miR-277 mature miRNA
• Sequence: 21 - UAAAUGCAUUUUCUGGCCCG - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596