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miRBase entry: ppy-mir-486
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
ppy-mir-486
Accession
MI0014958
Description
Pongo pygmaeus
ppy-mir-486 precursor miRNA
Sequence
Copy Sequence
gcaUCCUGUACUGAGCUGCCCCGAGgcccuucaugcugcccagcucggggcagcucaguacaggauac
..(((((((((((((((((((((((..................)))))))))))))))))))))))..
Structure
gc gcccuuca aUCCUGUACUGAGCUGCCCCGAG u ||||||||||||||||||||||| uaggacaugacucgacggggcuc g ca gacccguc
Annotation confidence
Not enough data
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Genome context
chr8: 42166395-42166462 [-]
Database links
Mature
ppy-miR-486-5p
Accession
MIMAT0015904
Description
Pongo pygmaeus
ppy-miR-486-5p mature miRNA
Sequence
4 - UCCUGUACUGAGCUGCCCCGAG - 25
Evidence
not_experimental
References
PubMed ID:
20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64