Stem-loop ppy-mir-331

Accession

MI0014899

Description

Pongo pygmaeus ppy-mir-331 precursor miRNA

Literature search

1 open access papers mention ppy-mir-331
(2 sentences)

Sequence

gaguuugguuuuguuuggguuuguuCUAGGUAUGGUCCCAGGGAUCCcagaucaaaccagGCCCCUGGGCCUAUCCUAaacaaccuaa
..............(((((((.(((.((((.((((.(((((((...((...........)).))))))).))))))))))))))))))

Structure

gaguuugguuuugu       u   C    U    U       AUC  agau 
              uuggguu guu UAGG AUGG CCCAGGG   Cc    c
              ||||||| ||| |||| |||| |||||||   ||    a
              aauccaa caa AUCC UAUC GGGUCCC   Gg    a
--------------       -   -    -    C       --C  acca 

Annotation confidence Low

Genome context

chr12: 96460018-96460105 [+]

Mature ppy-miR-331-5p

• Accession: MIMAT0015835
• Description: Pongo pygmaeus ppy-miR-331-5p mature miRNA
• Sequence: 26 - CUAGGUAUGGUCCCAGGGAUCC - 47
• Evidence: not_experimental

Mature ppy-miR-331-3p

• Accession: MIMAT0015836
• Description: Pongo pygmaeus ppy-miR-331-3p mature miRNA
• Sequence: 61 - GCCCCUGGGCCUAUCCUA - 78
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64