Stem-loop ppy-let-7f-1

Accession

MI0014786

Description

Pongo pygmaeus ppy-let-7f-1 precursor miRNA

Literature search

2 open access papers mention ppy-let-7f-1
(5 sentences)

Sequence

ucagagUGAGGUAGUAGAUUGUAUAGUUgugggguagugauuuuacccuguucaggagauaacuauacaaucuauugccuucccuga
((((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))))

Structure

    a U                       ---------       u 
ucag g GAGGUAGUAGAUUGUAUAGUUgu         gggguag g
|||| | |||||||||||||||||||||||         ||||||| a
aguc c uuccguuaucuaacauaucaaua         ucccauu u
    - c                       gaggacuug       u 

Annotation confidence Not enough data

Genome context

chr9: 89895138-89895224 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppy-let-7f-1

Mature ppy-let-7f

• Accession: MIMAT0015726
• Description: Pongo pygmaeus ppy-let-7f mature miRNA
• Sequence: 7 - UGAGGUAGUAGAUUGUAUAGUU - 28
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64