Stem-loop ssc-mir-369

Accession

MI0014774

Description

Sus scrofa ssc-mir-369 precursor miRNA

Literature search

4 open access papers mention ssc-mir-369
(4 sentences)

Sequence

55758 reads, 100.0 reads per million, 151 experiments

uugaagggAGAUCGACCGUGUUAUAUUCGcuuuaugguacuugaagggagaucgaccguguuauauucgcuuggcugacuucgaauaauacaugguugaucuuuucucaguaucugacuucgAAUAAUACAUGGUUGAUCUUUucucag
.(((.((((((((((((((((..((((((......((((((.((.((((((((((((((((..((((((...((....)).))))))..)))))))))))))))).))))))))......))))))..)))))))))))))))).))).

Structure

u   a                UA      cuuuau      u  a                ua      cuu  c 
 uga gggAGAUCGACCGUGU  UAUUCG      gguacu ga gggagaucgaccgugu  uauucg   gg u
 ||| ||||||||||||||||  ||||||      |||||| || ||||||||||||||||  ||||||   ||  
 acu uUUUCUAGUUGGUACA  AUAAgc      cuauga cu uuuucuaguugguaca  auaagc   uc g
g   c                UA      uucagu      -  c                ua      --u  a 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-369-5p

• Accession: MIMAT0052651
• Description: Sus scrofa ssc-miR-369-5p mature miRNA
• Sequence: 9 - AGAUCGACCGUGUUAUAUUCG - 29
• Evidence: experimental ; cloned [1]

Mature ssc-miR-369-3p

• Accession: MIMAT0015714
• Description: Sus scrofa ssc-miR-369-3p mature miRNA
• Sequence: 123 - AAUAAUACAUGGUUGAUCUUU - 143
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20180025
   Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
   "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
   "Mol Biol Rep (2010) 37:3567-3574