Stem-loop ssc-mir-299

Accession

MI0014772

Description

Sus scrofa ssc-mir-299 precursor miRNA

Literature search

4 open access papers mention ssc-mir-299
(4 sentences)

Sequence

126077 reads, 225.0 reads per million, 160 experiments

cgguacuugaagaaAUGGUUUACCGUCCCACAUACauuuugcauaugUAUGUGGGACGGUAAACCGCUUcuugguaucc
.((((((..(((((.((((((((((((((((((((((.......)))))))))))))))))))))).))))))))))).

Structure

c      ug     A                      uu 
 gguacu  aagaa UGGUUUACCGUCCCACAUACau  u
 ||||||  ||||| ||||||||||||||||||||||  g
 cuaugg  uucUU GCCAAAUGGCAGGGUGUAUgua  c
c      --     C                      ua 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-299-5p

• Accession: MIMAT0015712
• Description: Sus scrofa ssc-miR-299-5p mature miRNA
• Sequence: 15 - AUGGUUUACCGUCCCACAUAC - 35
• Evidence: experimental ; cloned [1], Illumina [2]

Mature ssc-miR-299-3p

• Accession: MIMAT0052649
• Description: Sus scrofa ssc-miR-299-3p mature miRNA
• Sequence: 48 - UAUGUGGGACGGUAAACCGCUU - 69
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 20180025
   Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue
   "Cho IS, Kim J, Seo HY, Lim DH, Hong JS, Park YH, Park DC, Hong KC, Whang KY, Lee YS"
   "Mol Biol Rep (2010) 37:3567-3574


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100