Stem-loop ssc-mir-744

Accession

MI0014769

Description

Sus scrofa ssc-mir-744 precursor miRNA

Literature search

6 open access papers mention ssc-mir-744
(11 sentences)

Sequence

451466 reads, 373.0 reads per million, 213 experiments

gcagggUGCGGGGCUAGGGCUAACAGCAgucuuacugaagguuuccuggaaaccacgcacAUGCUGUUGCCACUAACCUC
.........((((.((((((.(((((((...........((((((...)))))).......)))))))))).))).))))

Structure

gcagggUGC    C   -   U       gucuuacugaa      c 
         GGGG UAG GGC AACAGCA           gguuuc  
         |||| ||| ||| |||||||           |||||| u
         CUCC AUC CCG UUGUCGU           ccaaag  
---------    A   A   -       ----Acacgca      g 

Annotation confidence Medium

Genome context

chr12: 59358203-59358282 [+]

Mature ssc-miR-744-5p

• Accession: MIMAT0015708
• Description: Sus scrofa ssc-miR-744-5p mature miRNA
• Sequence: 7 - UGCGGGGCUAGGGCUAACAGCA - 28
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-744-3p

• Accession: MIMAT0052647
• Description: Sus scrofa ssc-miR-744-3p mature miRNA
• Sequence: 61 - AUGCUGUUGCCACUAACCUC - 80
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19917043
   MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
   "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
   "Anim Genet (2010) 41:159-168


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100