Stem-loop nvi-mir-283

Accession

MI0014730

Description

Nasonia vitripennis nvi-mir-283 precursor miRNA

Literature search

1 open access papers mention nvi-mir-283
(1 sentences)

Sequence

ugcuguccagucacguagucAAAUAUCAGCUGGUAAUUCUgggauacuuauuaugcagcccaggauucuugcugguauccgguuacgaacuggcucgucgcc
....(.(((((..(((((((..((((((((.((.(((((((((...(.......)...))))))))))).))))))))..))))))).))))))........

Structure

----ugcu u     ca       AA        U  U         aua uu 
        g ccagu  cguaguc  AUAUCAGC GG AAUUCUggg   c  a
        | |||||  |||||||  |||||||| || |||||||||   |  u
        c gguca  gcauugg  uauggucg uc uuaggaccc   g  u
ccgcugcu -     -a       cc        u  -         gac ua 

Annotation confidence Not enough data

Genome context

GL340882.1: 829662-829763 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from nvi-mir-283

Mature nvi-miR-283-5p

• Accession: MIMAT0015669
• Description: Nasonia vitripennis nvi-miR-283-5p mature miRNA
• Sequence: 21 - AAAUAUCAGCUGGUAAUUCU - 40
• Evidence: not_experimental

References

1. PubMed ID: 20075255
   Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
   "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
   "Science (2010) 327:343-348