miRBase entry: bhv1-mir-B10

Stem-loop bhv1-mir-B10


Accession
MI0014712
Description
Bovine herpesvirus 1 bhv1-mir-B10 precursor miRNA


Sequence

guggacgcuucgcgcggcugcgcccuggcccucuuggACAUGGCGGAGACGGUGGUGCCcggcggaccgc
((((.((((..((((.((((((((.((..((....)).)).))))....)))).))))..))))..))))

Structure
    -a    uc    g    ----    c  gc  u 
gugg  cgcu  gcgc gcug    cgcc ug  cc c
||||  ||||  |||| ||||    |||| ||  ||  
cgcc  gcgg  CGUG UGGC    GCGG AC  gg u
    ag    cC    G    AGAG    U  -A  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bhv1-miR-B10

Accession MIMAT0015649
Description Bovine herpesvirus 1 bhv1-miR-B10 mature miRNA
Sequence 38 - ACAUGGCGGAGACGGUGGUGCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19793906
    Characterization of microRNAs encoded by the bovine herpesvirus 1 genome
    "Glazov EA, Horwood PF, Assavalapsakul W, Kongsuwan K, Mitchell RW, Mitter N, Mahony TJ"
    "J Gen Virol (2010) 91:32-41