Accession
MI0014675
Description
Ectocarpus siliculosus
esi-MIR3454f precursor miRNA
Sequence
cgcggaguucUUCCAAGCUCCGACGGGAUGGcgaucgugacuagguccgccgccuuguaucacacgagcguggguacacccgugcgacucaaggcggcggaacuagccacgagcgucCUUCCGUCGGAGCUGGGUAGAauuucacga
((.((((((((.((.(((((((((((((.((((.(((((.((((.((((((((((((..((.((((.(.(((....)))))))).))..)))))))))))).)))).))))).)))).))))))))))))).)).)))))))).)).
((.((((((((.((.(((((((((((((.((((.(((((.((((.((((((((((((..((.((((.(.(((....)))))))).))..)))))))))))).)))).))))).)))).))))))))))))).)).)))))))).)).
Structure
- c U A U a a g ua a a c g cg ggaguucU CC AGCUCCGACGGGA GGcg ucgug cuag uccgccgccuug uc cacg g gug g || |||||||| || ||||||||||||| |||| ||||| |||| |||||||||||| || |||| | ||| gc cuuuaAGA GG UCGAGGCUGCCUU cugc agcac gauc aggcggcggaac ag gugc c cac u a a U G C g c a uc c - - a
Annotation confidence
Not enough data
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Genome context
sctg_168: 257266-257412 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from esi-MIR3454f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature esi-miR3454f-5p
| Accession | MIMAT0017753 |
| Description | Ectocarpus siliculosus esi-miR3454f-5p mature miRNA |
| Sequence | 11 - UUCCAAGCUCCGACGGGAUGG - 31 |
| Evidence |
experimental
Illumina [1] |
Mature esi-miR3454f-3p
| Accession | MIMAT0017754 |
| Description | Ectocarpus siliculosus esi-miR3454f-3p mature miRNA |
| Sequence | 118 - CUUCCGUCGGAGCUGGGUAGA - 138 |
| Evidence |
experimental
Illumina [1] |
References
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