Stem-loop esi-MIR3464

Accession

MI0014670

Description

Ectocarpus siliculosus esi-MIR3464 precursor miRNA

Sequence

agaccccucgacggUCGGAGUAUGGGUUGCGAUGGaaucaugguagauaaacaugcagacgacguccaggggaauaugaaaacuggacaucgucugcauguuuaucuaacaugauuccaUCGCAACCCAUACUCCGACGGucgaggggucu
((((((((((((.(((((((((((((((((((((((((((((.(((((((((((((((((((.((((((.............)))))).))))))))))))))))))).))))))))))))))))))))))))))))).))))))))))))

Structure

            g                             g                   c      gggaa 
agaccccucgac gUCGGAGUAUGGGUUGCGAUGGaaucaug uagauaaacaugcagacga guccag     u
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||     a
ucuggggagcuG CAGCCUCAUACCCAACGCUaccuuaguac aucuauuuguacgucugcu cagguc     u
            G                             a                   a      aaaag 

Annotation confidence Not enough data

Genome context

sctg_57: 505465-505615 [+]

Mature esi-miR3464-5p

• Accession: MIMAT0017743
• Description: Ectocarpus siliculosus esi-miR3464-5p mature miRNA
• Sequence: 15 - UCGGAGUAUGGGUUGCGAUGG - 35
• Evidence: experimental ; Illumina [1]

Mature esi-miR3464-3p

• Accession: MIMAT0017744
• Description: Ectocarpus siliculosus esi-miR3464-3p mature miRNA
• Sequence: 120 - UCGCAACCCAUACUCCGACGG - 140
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621