miRBase entry: mmu-mir-669d-2

Stem-loop mmu-mir-669d-2


Accession
MI0014051
Symbol
MGI: Mir669d-2
Description
Mus musculus mmu-mir-669d-2 precursor miRNA

Literature search
9 open access papers mention mmu-mir-669d-2
(12 sentences)

Sequence

2456 reads, 98 reads per million, 90 experiments
gugcauguguguauACUUGUGUGUGCAUGUAUAUGUgucuauaugaauauacAUAUACAUACACACCCAUAUACacacgcaugcac
((((((((((((.((..((.(((((.((((((((((((..........)))))))))))).))))).))..)).))))))))))))

Structure
            a  CU  U     C            cuau 
gugcaugugugu uA  UG GUGUG AUGUAUAUGUgu    a
|||||||||||| ||  || ||||| ||||||||||||     
cacguacgcaca AU  AC CACAC UACAUAUAcaua    u
            C  AU  C     A            uaag 


Annotation confidence High
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Genome context
chr2: 10471644-10471729 [+]
Clustered miRNAs
25 other miRNAs are < 10 kb from mmu-mir-669d-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-669d-5p

Accession MIMAT0005833
Description Mus musculus mmu-miR-669d-5p mature miRNA
Sequence 15 - ACUUGUGUGUGCAUGUAUAUGU - 36
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-669d-2-3p

Accession MIMAT0014884
Description Mus musculus mmu-miR-669d-2-3p mature miRNA
Sequence 53 - AUAUACAUACACACCCAUAUAC - 74
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009