Stem-loop mmu-mir-3070-1

Accession

MI0014032

Description

Mus musculus mmu-mir-3070-1 precursor miRNA mir-3070

Gene
family

RF03203; mir-3070

Sequence

150 reads, 2 reads per million, 26 experiments

gugcugagugaggcugAGCCCCUGACCUUGAACCUGGGAuccuauccaugaucuccUGGUGCUACCGUCAGGGGUAGAuuccuugucau
....(((..((((....(((((((((.....(((.((((((........)))).)).)))......))))))))).....)))).))).

Structure

gugc   gu    -cugA         -CUUGA   U  -    cua 
    uga  gagg     GCCCCUGAC      ACC GG GAuc   u
    |||  ||||     |||||||||      ||| || ||||    
    acu  uucc     UGGGGACUG      UGG cc cuag   c
---u   -g    uuAGA         CCAUCG   U  u    uac 

Annotation confidence Medium

Genome context

chr12: 109587943-109588031 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mmu-mir-3070-1

Mature mmu-miR-3070-5p

• Accession: MIMAT0014846
• Description: Mus musculus mmu-miR-3070-5p mature miRNA
• Sequence: 17 - AGCCCCUGACCUUGAACCUGGGA - 39
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-3070-3p

• Accession: MIMAT0014847
• Description: Mus musculus mmu-miR-3070-3p mature miRNA
• Sequence: 57 - UGGUGCUACCGUCAGGGGUAGA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009