Stem-loop api-mir-3052

Accession

MI0014012

Description

Acyrthosiphon pisum api-mir-3052 precursor miRNA

Sequence

cacaucaugauucucgugaagagggaguuuacucucucccaUGCAUUCUUUGAGCUUAGCAUGAUGGCU
..(((((((...((((.(((..(((((........))))).....)))..)))).....)))))))...

Structure

-ca       --auu    -u   ---ga     uuu 
   caucaug     cucg  gaa     gggag   a
   |||||||     ||||  |||     |||||    
   GUAGUAC     GAGU  CUU     cccuc   c
UCG       GAUUC    UU   ACGUa     ucu 

Annotation confidence Not enough data

Genome context

GL349667.1: 508338-508406 [+]

Mature api-miR-3052

• Accession: MIMAT0014793
• Description: Acyrthosiphon pisum api-miR-3052 mature miRNA
• Sequence: 42 - UGCAUUCUUUGAGCUUAGCAUGAUGGCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281