Stem-loop api-mir-3048

Accession

MI0014006

Description

Acyrthosiphon pisum api-mir-3048 precursor miRNA

Sequence

gagagcaugaccagugugccauauaaaaccuuuuucucaUGUGAACUGGUCAUGCUCUUAA
(((((((((((((((....(((((..............))))).)))))))))))))))..

Structure

--               gugc     aaaacc 
  gagagcaugaccagu    cauau      u
  |||||||||||||||    |||||       
  UUCUCGUACUGGUCA    GUGUa      u
AA               ---A     cucuuu 

Annotation confidence Not enough data

Genome context

GL349795.1: 771724-771784 [+]

Mature api-miR-3048

• Accession: MIMAT0014788
• Description: Acyrthosiphon pisum api-miR-3048 mature miRNA
• Sequence: 40 - UGUGAACUGGUCAUGCUCUUAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281