Stem-loop api-mir-3017b-1

Accession

MI0013998

Description

Acyrthosiphon pisum api-mir-3017b-1 precursor miRNA

Sequence

ccguguucugugacugacucggcuggcaacggacugagcccucCGGUCUGUCACGGAACACGGGA
((((((((((((((.(((.(((..(((..........)))..)))))).))))))))))))))..

Structure

--              u   u   cu   aacg 
  ccguguucugugac gac cgg  ggc    g
  |||||||||||||| ||| |||  |||     
  GGCACAAGGCACUG CUG GCc  ccg    a
AG              U   -   uc   aguc 

Annotation confidence Not enough data

Genome context

GL349670.1: 628441-628505 [+]

Mature api-miR-3017b

• Accession: MIMAT0014783
• Description: Acyrthosiphon pisum api-miR-3017b mature miRNA
• Sequence: 44 - CGGUCUGUCACGGAACACGGGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281