Stem-loop api-mir-3039

Accession

MI0013990

Description

Acyrthosiphon pisum api-mir-3039 precursor miRNA

Sequence

25 reads, 2.0 reads per million, 2 experiments

accguguuuucccgguuuucuguaucauccauaucguggAAAAACGUCAAAACACGGUGG
((((((((((..((..(((((((((.....))))...)))))..))..))))))))))..

Structure

--          cc  gu     ---    c 
  accguguuuu  cg  uuucu   guau a
  ||||||||||  ||  |||||   |||| u
  UGGCACAAAA  GC  AAAgg   uaua c
GG          CU  AA     ugc    c 

Annotation confidence Not enough data

Genome context

GL350173.1: 213598-213657 [+]

Mature api-miR-3039-3p

• Accession: MIMAT0014777
• Description: Acyrthosiphon pisum api-miR-3039-3p mature miRNA
• Sequence: 40 - AAAAACGUCAAAACACGGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281