Stem-loop api-mir-7

Accession

MI0013936

Description

Acyrthosiphon pisum api-mir-7 precursor miRNA

Literature search

1 open access papers mention api-mir-7
(7 sentences)

Sequence

UGGAAGACUAGUGAUUUUGUUGUUuuaaaaaaaaaguauuuuccuaacaagaagucucuagucuucuuac
.((((((((((.((((((.(((((...((((.......))))...))))))))))).))))))))))...

Structure

--U          U      G     uua    aa 
   GGAAGACUAG GAUUUU UUGUU   aaaa  a
   |||||||||| |||||| |||||   ||||  a
   ucuucugauc cugaag aacaa   uuuu  g
cau          u      -     ucc    au 

Annotation confidence Not enough data

Genome context

GL349691.1: 921851-921920 [+]

Mature api-miR-7

• Accession: MIMAT0014734
• Description: Acyrthosiphon pisum api-miR-7 mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281