Stem-loop hma-mir-2030

Accession

MI0013877

Description

Hydra magnipapillata hma-mir-2030 precursor miRNA

Sequence

auucccaggguagcauaacauuguaagaaacauuuauugCGUCUUACACUGCUGUGCUACccaggguag
...(((.((((((((((.((.(((((((..((.....))..))))))).)).)))))))))).)))...

Structure

auu   a          a  u       aa  u 
   ccc ggguagcaua ca uguaaga  ca u
   ||| |||||||||| || |||||||  || u
   ggg ccCAUCGUGU GU ACAUUCU  gu a
gau   a          C  C       GC  u 

Annotation confidence Low

Genome context

Unknown

Mature hma-miR-2030

• Accession: MIMAT0014684
• Description: Hydra magnipapillata hma-miR-2030 mature miRNA
• Sequence: 40 - CGUCUUACACUGCUGUGCUAC - 60
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20228792
   The dynamic genome of Hydra
   "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
   "Nature (2010) 464:592-596