Stem-loop hma-mir-3005

Accession

MI0013866

Description

Hydra magnipapillata hma-mir-3005 precursor miRNA

Sequence

auaaacugaaaauuuaggaaccggucagucgccaaccauguuggUUGGUGGAUGAUUGAUUCCUAAaauuucaguuaau
...((((((((.((((((((.((((((.((((((((((...)))))))))).)))))).)))))))).))))))))...

Structure

aua        a        c      g          u 
   aacugaaa uuuaggaa cgguca ucgccaacca  
   |||||||| |||||||| |||||| |||||||||| g
   uugacuuu aAAUCCUU GUUAGU GGUGGUUggu  
uaa        a        A      A          u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hma-miR-3005

• Accession: MIMAT0014672
• Description: Hydra magnipapillata hma-miR-3005 mature miRNA
• Sequence: 45 - UUGGUGGAUGAUUGAUUCCUAA - 66
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20228792
   The dynamic genome of Hydra
   "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
   "Nature (2010) 464:592-596