Stem-loop tgu-mir-31

Accession

MI0013845

Description

Taeniopygia guttata tgu-mir-31 precursor miRNA

Gene family

MIPF0000064; mir-31

Sequence

uuccuuuaugcagagcuggagaggAGGCAAGAUGUUGGCAUAGCUGuugaucuaaaaaccugcuaugccaacauauugucaucuuuccugucuguuugcggcagaggga
(((((((.((((((((.(((((((.(((((.(((((((((((((.(((........)))..))))))))))))).))))).))))))).))...))))))..)))))))

Structure

       -a      ---  u       A     G             -U   gau 
uuccuuu  ugcaga   gc ggagagg GGCAA AUGUUGGCAUAGC  Guu   c
|||||||  ||||||   || ||||||| ||||| |||||||||||||  |||    
agggaga  gcguuu   ug ccuuucu cuguu uacaaccguaucg  caa   u
       cg      guc  u       a     a             uc   aaa 

Annotation confidence Not enough data

Genome context

chrZ: 32186011-32186119 [+]

Mature tgu-miR-31

• Accession: MIMAT0014615
• Description: Taeniopygia guttata tgu-miR-31 mature miRNA
• Sequence: 25 - AGGCAAGAUGUUGGCAUAGCUG - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762