Stem-loop tgu-mir-2968

Accession

MI0013663

Description

Taeniopygia guttata tgu-mir-2968 precursor miRNA

Sequence

gcugcccugcgaguugcuauccuccaggucgcucuggcagcccucgucguugagcgagCUCUGCUUGGUGACCUUGGGCGAcagcagcuucaccaggucgcccagc
((((.((((.((((((((.(((((.((((((((..(((((..(((((......)))))..))))).)))))))).))).)).))))))))...)))).....))))

Structure

    ----c    --c        a  -   c        cu     cc     cg 
gcug     ccug   gaguugcu uc cuc aggucgcu  ggcag  cucgu  u
||||     ||||   |||||||| || ||| ||||||||  |||||  |||||   
cgac     ggac   uucgacga AG GGG UCCAGUGG  UCGUC  gagcg  u
    ccgcu    cac        c  C   U        -U     UC     ag 

Annotation confidence Not enough data

Genome context

chr4: 46377079-46377184 [-]

Mature tgu-miR-2968

• Accession: MIMAT0014477
• Description: Taeniopygia guttata tgu-miR-2968 mature miRNA
• Sequence: 59 - CUCUGCUUGGUGACCUUGGGCGA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762