Stem-loop tgu-mir-2966

Accession

MI0013659

Description

Taeniopygia guttata tgu-mir-2966 precursor miRNA

Sequence

ccccgcgccgcgcccguggcugcccgcagcgcugcccgugcuccgggagcgCCGGGACGGGACCGGGACGGGaacgggg
(((((..((.((((((...(((((((..(((((.((((.....))))))))))))).)))...)))).))))..)))))

Structure

     cg  g  -    ugg   -    ca     g    u 
ccccg  cc cg cccg   cug cccg  gcgcu cccg g
|||||  || || ||||   ||| ||||  ||||| |||| c
ggggc  GG GC GGGC   GGC GGGC  Cgcga gggc u
     aa  -  A    CAG   A    --     -    c 

Annotation confidence Not enough data

Genome context

chr8: 3476812-3476890 [+]

Mature tgu-miR-2966

• Accession: MIMAT0014473
• Description: Taeniopygia guttata tgu-miR-2966 mature miRNA
• Sequence: 52 - CCGGGACGGGACCGGGACGGG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762