Stem-loop cqu-mir-275

Accession

MI0013568

Description

Culex quinquefasciatus cqu-mir-275 precursor miRNA

Literature search

2 open access papers mention cqu-mir-275
(4 sentences)

Sequence

cccggaauccuuccgauagcgcgcgcuaagcaggaaccgggacuuggucauucgcuagcagUCAGGUACCUGAAGUAGCGCgcgugaucggaagugccgcc
..(((....((((((((.((((((((((..((((.(((..((((((((.....))))..)))).))).))))...)))))))))).))))))))..)))..

Structure

cc   aauc        a          -ag    a   gg    --    c 
  cgg    cuuccgau gcgcgcgcua   cagg acc  gacu  uggu a
  |||    |||||||| ||||||||||   |||| |||  ||||  |||| u
  gcc    gaaggcua ugcgCGCGAU   GUCC UGG  CUga  aucg u
cc   --gu        g          GAA    A   -A    cg    c 

Annotation confidence Not enough data

Genome context

supercont3.291: 329754-329854 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cqu-mir-275

Mature cqu-miR-275

• Accession: MIMAT0014364
• Description: Culex quinquefasciatus cqu-miR-275 mature miRNA
• Sequence: 62 - UCAGGUACCUGAAGUAGCGC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119