Stem-loop hsv2-mir-H7

Accession

MI0013558

Description

Herpes Simplex Virus 2 hsv2-mir-H7 precursor miRNA

Gene family

MIPF0000929; mir-H7

Sequence

ggggagAAAGGGGUCCGUAACCAAAGGuggucugcguccUUUGGAUUCCGACCCCUCGUCucccc
(((((((.(((((((.(...(((((((((.....)).)))))))...).)))))))..)))))))

Structure

       -A       C UAA       -  g 
ggggagA  AGGGGUC G   CCAAAGG ug u
|||||||  ||||||| |   ||||||| || c
ccccuCU  UCCCCAG C   GGUUUcc gc u
       GC       C UUA       u  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv2-miR-H7-5p

• Accession: MIMAT0014351
• Description: Herpes Simplex Virus 2 hsv2-miR-H7-5p mature miRNA
• Sequence: 7 - AAAGGGGUCCGUAACCAAAGG - 27
• Evidence: experimental ; Illumina [1-2]

Mature hsv2-miR-H7-3p

• Accession: MIMAT0015375
• Description: Herpes Simplex Virus 2 hsv2-miR-H7-3p mature miRNA
• Sequence: 40 - UUUGGAUUCCGACCCCUCGUC - 60
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672


2. PubMed ID: 19889786
   Identification of viral microRNAs expressed in human sacral ganglia latently infected with herpes simplex virus 2
   "Umbach JL, Wang K, Tang S, Krause PR, Mont EK, Cohen JI, Cullen BR"
   "J Virol (2010) 84:1189-1192