Stem-loop aae-mir-2946

Accession

MI0013532

Description

Aedes aegypti aae-mir-2946 precursor miRNA

Literature search

1 open access papers mention aae-mir-2946
(1 sentences)

Sequence

38 reads, 2 reads per million, 2 experiments

uaugaacaaugaucgccauauuuuuaccgcuacugcauuucauuguaauaauugUAGUACGGAAAAGAUAUGGGGAuugggguucaua
(((((((..(((((.((((((((((.(((.(((((((...............)))))))))).)))))))))).)))))..)))))))

Structure

       aa     g          a   c       uuucau 
uaugaac  ugauc ccauauuuuu ccg uacugca      u
|||||||  ||||| |||||||||| ||| |||||||      g
auacuug  guuAG GGUAUAGAAA GGC AUGAUgu      u
       gg     G          A   -       uaauaa 

Annotation confidence Not enough data

Genome context

supercont1.385: 413565-413652 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aae-mir-2946

Mature aae-miR-2946

• Accession: MIMAT0014325
• Description: Aedes aegypti aae-miR-2946 mature miRNA
• Sequence: 55 - UAGUACGGAAAAGAUAUGGGGA - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581