Stem-loop aae-mir-9b

Accession

MI0013530

Description

Aedes aegypti aae-mir-9b precursor miRNA

Literature search

3 open access papers mention aae-mir-9b
(12 sentences)

Sequence

1001 reads, 52 reads per million, 2 experiments

ucacguuuauuggaUCUUUGGUGAUUUUAGCUGUAUGCugauacguuucugauugcauauagcuuuaucaccaaaaaccuaaugaaugguga
(((((((((((((...(((((((((...((((((((((................))))))))))..)))))))))...))))))))).))))

Structure

    -         aUC         UUU          ugauacg 
ucac guuuauugg   UUUGGUGAU   AGCUGUAUGC       u
|||| |||||||||   |||||||||   ||||||||||        
agug uaaguaauc   aaaccacua   ucgauauacg       u
    g         caa         -uu          uuagucu 

Annotation confidence Not enough data

Genome context

supercont1.785: 213570-213661 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from aae-mir-9b

Mature aae-miR-9b

• Accession: MIMAT0014324
• Description: Aedes aegypti aae-miR-9b mature miRNA
• Sequence: 15 - UCUUUGGUGAUUUUAGCUGUAUGC - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581