miRBase entry: aae-mir-2945

Stem-loop aae-mir-2945


Accession
MI0013522
Description
Aedes aegypti aae-mir-2945 precursor miRNA

Literature search
2 open access papers mention aae-mir-2945
(3 sentences)

Sequence

317810 reads, 16290 reads per million, 2 experiments
ucugaucugAGCGGGUCCGUUUCUAGUGUCAUGugcuguauucgaauaucaUGACUAGAGGCAGACUCGUUUAggucuggga
(((((((((((((((((.(((((((..((((((................))))))))))))).)))))))))))))).))).

Structure
-   -              C       GU      ugcugua 
 ucu gaucugAGCGGGUC GUUUCUA  GUCAUG       u
 ||| |||||||||||||| |||||||  ||||||        
 ggg cuggAUUUGCUCAG CGGAGAU  CAGUac       u
a   u              A       --      uauaagc 


Annotation confidence High
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Genome context
supercont1.43: 958687-958768 [+]

Database links

Mature aae-miR-2945-5p

Accession MIMAT0014315
Description Aedes aegypti aae-miR-2945-5p mature miRNA
Sequence 10 - AGCGGGUCCGUUUCUAGUGUCAUG - 33
Evidence experimental
454 [1]

Mature aae-miR-2945-3p

Accession MIMAT0014316
Description Aedes aegypti aae-miR-2945-3p mature miRNA
Sequence 52 - UGACUAGAGGCAGACUCGUUUA - 73
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581