Stem-loop aae-mir-282-2

Accession

MI0013518

Description

Aedes aegypti aae-mir-282-2 precursor miRNA

Literature search

2 open access papers mention aae-mir-282-2
(4 sentences)

Sequence

10730 reads, 62.0 reads per million, 80 experiments

aucgucaucgucaucgucgcacagguguaaucUAGCCUCUCCUAGGCUUUGUCUguuaccuuccuugggaauuccacuagccagACAUAGCCUGACAGAGGUUAGGugaaaucugaaaagucaacggccaacggu
......(((((..((((.((.(((((...(((((((((((..((((((.((((((((((((.....)))........))).)))))).))))))..)))))))))))...)))))....))..))))...)))))

Structure

aucguc     -ca    -c  ---a     gua           CC      U      -   --------   u 
      aucgu   ucgu  gc    caggu   aucUAGCCUCU  UAGGCU UGUCUg uua        ccu c
      |||||   ||||  ||    |||||   |||||||||||  |||||| |||||| |||        ||| c
      uggca   ggca  ug    gucua   uGGAUUGGAGA  GUCCGA ACAgac gau        ggg u
------     acc    ac  aaaa     aag           CA      U      c   caccuuaa   u 

Annotation confidence High

Genome context

ref|NW_001811104.1|: 313203-313337 [-]

Mature aae-miR-282-5p

• Accession: MIMAT0014311
• Description: Aedes aegypti aae-miR-282-5p mature miRNA
• Sequence: 33 - UAGCCUCUCCUAGGCUUUGUCU - 54
• Evidence: experimental ; 454 [1]

Mature aae-miR-282-3p

• Accession: MIMAT0014312
• Description: Aedes aegypti aae-miR-282-3p mature miRNA
• Sequence: 85 - ACAUAGCCUGACAGAGGUUAGG - 106
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581